STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY90398.1Hypothetical protein. (87 aa)    
Predicted Functional Partners:
SCY90412.1
TIGR02301 family protein.
 
     0.829
SCX97781.1
Putative peptidoglycan binding domain-containing protein.
  
     0.745
SCZ04482.1
Phasin.
  
     0.736
SCX97628.1
Uncharacterized membrane protein.
  
     0.718
SCY03695.1
Flagellar export protein FliJ.
  
     0.704
SCX95005.1
Hypothetical protein.
  
     0.691
SCY03827.1
Hypothetical protein.
  
     0.691
SCY73791.1
Apolipoprotein A1/A4/E domain-containing protein.
  
     0.686
SCZ02664.1
Hypothetical protein.
  
     0.680
SCZ05215.1
Hypothetical protein.
  
     0.650
Your Current Organism:
Microvirga guangxiensis
NCBI taxonomy Id: 549386
Other names: CGMCC 1.7666, JCM 15710, M. guangxiensis, Microvirga guangxiensis Zhang et al. 2009, Microvirga sp. 25B, strain 25B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.