STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY98434.1TRAP-type C4-dicarboxylate transport system, small permease component. (185 aa)    
Predicted Functional Partners:
SCY98449.1
TRAP transporter, DctM subunit.
 
 0.966
SCY98416.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
  
 0.924
SCZ07822.1
TRAP transporter, DctM subunit.
 
 0.813
SCZ07815.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
  
  0.808
SCY31593.1
TRAP transporter, DctM subunit.
 
 0.804
SCZ06508.1
TRAP transporter, DctM subunit.
 
 0.804
SCZ06501.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
  
  0.799
SCY31626.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
 0.782
SCZ06478.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
  
 0.770
SCZ07826.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
  
 0.770
Your Current Organism:
Microvirga guangxiensis
NCBI taxonomy Id: 549386
Other names: CGMCC 1.7666, JCM 15710, M. guangxiensis, Microvirga guangxiensis Zhang et al. 2009, Microvirga sp. 25B, strain 25B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.