STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY98581.1Ornithine cyclodeaminase. (318 aa)    
Predicted Functional Partners:
SCY98569.1
D-amino-acid dehydrogenase.
 
 
  0.828
SCY23419.1
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
 
 0.799
SCY98592.1
Microcystin degradation protein MlrC, contains DUF1485 domain; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
       0.773
SCX90735.1
Ornithine cyclodeaminase.
  
     0.706
SCY51894.1
Ornithine cyclodeaminase.
  
  
 
0.592
SCY50499.1
Proline racemase; Belongs to the proline racemase family.
 
  
 0.534
SCZ00376.1
Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase.
 
  
  0.517
SCX90695.1
Arginase; Belongs to the arginase family.
    
 0.508
SCZ02241.1
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.508
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
   
 
 0.496
Your Current Organism:
Microvirga guangxiensis
NCBI taxonomy Id: 549386
Other names: CGMCC 1.7666, JCM 15710, M. guangxiensis, Microvirga guangxiensis Zhang et al. 2009, Microvirga sp. 25B, strain 25B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.