Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCX99515.1 | SCY35186.1 | SAMN02927923_00509 | SAMN02927923_01249 | Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Sulfate permease, SulP family. | 0.969 |
SCX99515.1 | SCY58103.1 | SAMN02927923_00509 | SAMN02927923_01748 | Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Hypothetical protein. | 0.939 |
SCX99515.1 | SCZ00481.1 | SAMN02927923_00509 | SAMN02927923_03357 | Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Hypothetical protein. | 0.939 |
SCX99515.1 | SCZ05292.1 | SAMN02927923_00509 | SAMN02927923_03704 | Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | DNA repair exonuclease SbcCD nuclease subunit. | 0.867 |
SCX99515.1 | polA | SAMN02927923_00509 | SAMN02927923_01568 | Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.589 |
SCY35186.1 | SCX99515.1 | SAMN02927923_01249 | SAMN02927923_00509 | Sulfate permease, SulP family. | Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.969 |
SCY35186.1 | SCY58103.1 | SAMN02927923_01249 | SAMN02927923_01748 | Sulfate permease, SulP family. | Hypothetical protein. | 0.950 |
SCY35186.1 | SCZ00481.1 | SAMN02927923_01249 | SAMN02927923_03357 | Sulfate permease, SulP family. | Hypothetical protein. | 0.950 |
SCY35186.1 | SCZ05292.1 | SAMN02927923_01249 | SAMN02927923_03704 | Sulfate permease, SulP family. | DNA repair exonuclease SbcCD nuclease subunit. | 0.932 |
SCY54153.1 | SCY58103.1 | SAMN02927923_01614 | SAMN02927923_01748 | ATP-dependent DNA helicase RecQ. | Hypothetical protein. | 0.434 |
SCY54153.1 | SCY69771.1 | SAMN02927923_01614 | SAMN02927923_02017 | ATP-dependent DNA helicase RecQ. | Cytochrome P450. | 0.798 |
SCY54153.1 | SCZ00481.1 | SAMN02927923_01614 | SAMN02927923_03357 | ATP-dependent DNA helicase RecQ. | Hypothetical protein. | 0.434 |
SCY54153.1 | SCZ05292.1 | SAMN02927923_01614 | SAMN02927923_03704 | ATP-dependent DNA helicase RecQ. | DNA repair exonuclease SbcCD nuclease subunit. | 0.991 |
SCY54153.1 | polA | SAMN02927923_01614 | SAMN02927923_01568 | ATP-dependent DNA helicase RecQ. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.997 |
SCY54153.1 | topA | SAMN02927923_01614 | SAMN02927923_03928 | ATP-dependent DNA helicase RecQ. | DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.997 |
SCY58103.1 | SCX99515.1 | SAMN02927923_01748 | SAMN02927923_00509 | Hypothetical protein. | Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.939 |
SCY58103.1 | SCY35186.1 | SAMN02927923_01748 | SAMN02927923_01249 | Hypothetical protein. | Sulfate permease, SulP family. | 0.950 |
SCY58103.1 | SCY54153.1 | SAMN02927923_01748 | SAMN02927923_01614 | Hypothetical protein. | ATP-dependent DNA helicase RecQ. | 0.434 |
SCY58103.1 | SCY69771.1 | SAMN02927923_01748 | SAMN02927923_02017 | Hypothetical protein. | Cytochrome P450. | 0.730 |
SCY58103.1 | SCZ05292.1 | SAMN02927923_01748 | SAMN02927923_03704 | Hypothetical protein. | DNA repair exonuclease SbcCD nuclease subunit. | 0.876 |
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