Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCZ08884.1 | SCZ08891.1 | SAMN02927923_04002 | SAMN02927923_04003 | Adenine-specific DNA-methyltransferase. | Type III restriction enzyme. | 0.944 |
SCZ08884.1 | SCZ08902.1 | SAMN02927923_04002 | SAMN02927923_04004 | Adenine-specific DNA-methyltransferase. | Hypothetical protein. | 0.468 |
SCZ08891.1 | SCZ08884.1 | SAMN02927923_04003 | SAMN02927923_04002 | Type III restriction enzyme. | Adenine-specific DNA-methyltransferase. | 0.944 |
SCZ08891.1 | SCZ08902.1 | SAMN02927923_04003 | SAMN02927923_04004 | Type III restriction enzyme. | Hypothetical protein. | 0.476 |
SCZ08902.1 | SCZ08884.1 | SAMN02927923_04004 | SAMN02927923_04002 | Hypothetical protein. | Adenine-specific DNA-methyltransferase. | 0.468 |
SCZ08902.1 | SCZ08891.1 | SAMN02927923_04004 | SAMN02927923_04003 | Hypothetical protein. | Type III restriction enzyme. | 0.476 |
SCZ08902.1 | mltG | SAMN02927923_04004 | SAMN02927923_00224 | Hypothetical protein. | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.546 |
mltG | SCZ08902.1 | SAMN02927923_00224 | SAMN02927923_04004 | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | Hypothetical protein. | 0.546 |