STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ11234.1Uncharacterized conserved protein, contains Zn-finger domain. (100 aa)    
Predicted Functional Partners:
SCZ11242.1
Salicylate hydroxylase.
 
     0.840
SCY03695.1
Flagellar export protein FliJ.
  
     0.774
SCZ11114.1
Hypothetical protein.
  
     0.774
SCY89128.1
Invasion protein IalB, involved in pathogenesis.
  
     0.773
SCZ02822.1
Uncharacterized membrane protein.
  
     0.773
SCY90412.1
TIGR02301 family protein.
  
     0.771
SCX97593.1
Hypothetical protein.
  
     0.762
SCY73791.1
Apolipoprotein A1/A4/E domain-containing protein.
  
     0.762
SCZ11227.1
Pimeloyl-ACP methyl ester carboxylesterase.
 
     0.759
SCZ02664.1
Hypothetical protein.
  
     0.757
Your Current Organism:
Microvirga guangxiensis
NCBI taxonomy Id: 549386
Other names: CGMCC 1.7666, JCM 15710, M. guangxiensis, Microvirga guangxiensis Zhang et al. 2009, Microvirga sp. 25B, strain 25B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.