STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ11567.1Hypothetical protein. (184 aa)    
Predicted Functional Partners:
SCZ11558.1
Cyclopropane-fatty-acyl-phospholipid synthase.
       0.664
SCZ11549.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
       0.529
SCZ11575.1
LTXXQ motif family protein.
       0.470
SCZ11542.1
Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
       0.435
SCZ11114.1
Hypothetical protein.
  
     0.422
SCZ11234.1
Uncharacterized conserved protein, contains Zn-finger domain.
  
     0.412
SCY69333.1
EamA-like transporter family protein.
  
     0.405
SCY73791.1
Apolipoprotein A1/A4/E domain-containing protein.
  
     0.405
Your Current Organism:
Microvirga guangxiensis
NCBI taxonomy Id: 549386
Other names: CGMCC 1.7666, JCM 15710, M. guangxiensis, Microvirga guangxiensis Zhang et al. 2009, Microvirga sp. 25B, strain 25B
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.