STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ12286.1Glycosyltransferase, GT2 family. (744 aa)    
Predicted Functional Partners:
SCY57447.1
Undecaprenyl-phosphate glucose phosphotransferase.
  
 
 0.967
SCZ12262.1
Hypothetical protein.
 
  
 0.962
SCZ12268.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.947
SCZ12278.1
Methyltransferase domain-containing protein.
 
     0.944
SCZ12244.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.898
SCZ12235.1
Polysaccharide pyruvyl transferase.
 
     0.878
SCZ12251.1
Hypothetical protein.
 
    
0.723
SCY00750.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.703
SCY90940.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.686
SCY48634.1
O-antigen biosynthesis protein WbqV.
  
 
 0.655
Your Current Organism:
Microvirga guangxiensis
NCBI taxonomy Id: 549386
Other names: CGMCC 1.7666, JCM 15710, M. guangxiensis, Microvirga guangxiensis Zhang et al. 2009, Microvirga sp. 25B, strain 25B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.