Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCY06355.1 | SCY28091.1 | SAMN02927923_00682 | SAMN02927923_01041 | MgtE intracellular N domain-containing protein. | comF family protein. | 0.808 |
SCY06355.1 | SCZ07922.1 | SAMN02927923_00682 | SAMN02927923_03933 | MgtE intracellular N domain-containing protein. | DNA processing protein. | 0.578 |
SCY06355.1 | SCZ12319.1 | SAMN02927923_00682 | SAMN02927923_04327 | MgtE intracellular N domain-containing protein. | DNA-binding transcriptional regulator, MarR family. | 0.534 |
SCY06355.1 | flgH | SAMN02927923_00682 | SAMN02927923_00681 | MgtE intracellular N domain-containing protein. | Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.990 |
SCY06355.1 | fliE | SAMN02927923_00682 | SAMN02927923_00686 | MgtE intracellular N domain-containing protein. | Flagellar hook-basal body complex protein FliE. | 0.989 |
SCY06355.1 | fliP | SAMN02927923_00682 | SAMN02927923_00679 | MgtE intracellular N domain-containing protein. | Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. | 0.977 |
SCY18838.1 | SCY20446.1 | SAMN02927923_00799 | SAMN02927923_00839 | Hypothetical protein. | HemY protein. | 0.717 |
SCY18838.1 | SCZ12319.1 | SAMN02927923_00799 | SAMN02927923_04327 | Hypothetical protein. | DNA-binding transcriptional regulator, MarR family. | 0.651 |
SCY20446.1 | SCY18838.1 | SAMN02927923_00839 | SAMN02927923_00799 | HemY protein. | Hypothetical protein. | 0.717 |
SCY20446.1 | SCY56785.1 | SAMN02927923_00839 | SAMN02927923_01704 | HemY protein. | Hypothetical protein. | 0.726 |
SCY20446.1 | SCZ12319.1 | SAMN02927923_00839 | SAMN02927923_04327 | HemY protein. | DNA-binding transcriptional regulator, MarR family. | 0.500 |
SCY28091.1 | SCY06355.1 | SAMN02927923_01041 | SAMN02927923_00682 | comF family protein. | MgtE intracellular N domain-containing protein. | 0.808 |
SCY28091.1 | SCZ07922.1 | SAMN02927923_01041 | SAMN02927923_03933 | comF family protein. | DNA processing protein. | 0.918 |
SCY28091.1 | SCZ12319.1 | SAMN02927923_01041 | SAMN02927923_04327 | comF family protein. | DNA-binding transcriptional regulator, MarR family. | 0.565 |
SCY28091.1 | flgH | SAMN02927923_01041 | SAMN02927923_00681 | comF family protein. | Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.471 |
SCY28091.1 | fliP | SAMN02927923_01041 | SAMN02927923_00679 | comF family protein. | Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. | 0.604 |
SCY56785.1 | SCY20446.1 | SAMN02927923_01704 | SAMN02927923_00839 | Hypothetical protein. | HemY protein. | 0.726 |
SCY56785.1 | SCZ09103.1 | SAMN02927923_01704 | SAMN02927923_04032 | Hypothetical protein. | BMFP domain-containing protein YqiC. | 0.449 |
SCY56785.1 | SCZ12319.1 | SAMN02927923_01704 | SAMN02927923_04327 | Hypothetical protein. | DNA-binding transcriptional regulator, MarR family. | 0.677 |
SCZ07922.1 | SCY06355.1 | SAMN02927923_03933 | SAMN02927923_00682 | DNA processing protein. | MgtE intracellular N domain-containing protein. | 0.578 |
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