STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CWS20_05880Unannotated protein. (61 aa)    
Predicted Functional Partners:
GCA_001636335_00660
Unannotated protein.
  
     0.693
GCA_001636335_01630
Unannotated protein.
  
     0.693
GCA_001636335_02986
Unannotated protein.
  
     0.657
GCA_001636335_03055
Unannotated protein.
  
     0.623
hpr
Unannotated protein; Negative regulator of protease production and sporulation.
  
     0.611
GCA_001636335_02052
Unannotated protein.
  
     0.611
GCA_001636335_00549
Unannotated protein.
  
     0.600
GCA_001636335_01586
Unannotated protein.
  
     0.583
GCA_001636335_02795
Unannotated protein.
  
     0.568
GCA_001636335_01716
Unannotated protein.
  
     0.563
Your Current Organism:
Bacillus horneckiae
NCBI taxonomy Id: 549687
Other names: B. horneckiae, Bacillus horneckiae Vaishampayan et al. 2010, Bacillus sp. As-14, MTCC 9535, NRRL B-59162, strain 1P01SC
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.