Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CWS20_02800 | GCA_001636335_01693 | GCA_001636335_00976 | GCA_001636335_01693 | Unannotated protein; One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation; Belongs to the FliG family. | Unannotated protein. | 0.756 |
CWS20_02800 | GCA_001636335_02833 | GCA_001636335_00976 | GCA_001636335_02833 | Unannotated protein; One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation; Belongs to the FliG family. | Unannotated protein. | 0.646 |
CWS20_19715 | GCA_001636335_01693 | GCA_001636335_01895 | GCA_001636335_01693 | Unannotated protein; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Unannotated protein. | 0.749 |
CWS20_19715 | GCA_001636335_01753 | GCA_001636335_01895 | GCA_001636335_01753 | Unannotated protein; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Unannotated protein. | 0.851 |
CWS20_19715 | GCA_001636335_02147 | GCA_001636335_01895 | GCA_001636335_02147 | Unannotated protein; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Unannotated protein. | 0.699 |
CWS20_19715 | deoA | GCA_001636335_01895 | GCA_001636335_01894 | Unannotated protein; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Unannotated protein. | 0.934 |
CWS20_19715 | hpt | GCA_001636335_01895 | GCA_001636335_03371 | Unannotated protein; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Unannotated protein; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.889 |
CWS20_19715 | psuG | GCA_001636335_01895 | GCA_001636335_00071 | Unannotated protein; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Unannotated protein; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. | 0.650 |
CWS20_19715 | upp | GCA_001636335_01895 | GCA_001636335_03031 | Unannotated protein; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Unannotated protein; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.749 |
GCA_001636335_01693 | CWS20_02800 | GCA_001636335_01693 | GCA_001636335_00976 | Unannotated protein. | Unannotated protein; One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation; Belongs to the FliG family. | 0.756 |
GCA_001636335_01693 | CWS20_19715 | GCA_001636335_01693 | GCA_001636335_01895 | Unannotated protein. | Unannotated protein; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.749 |
GCA_001636335_01693 | GCA_001636335_01694 | GCA_001636335_01693 | GCA_001636335_01694 | Unannotated protein. | Unannotated protein. | 0.732 |
GCA_001636335_01693 | GCA_001636335_01753 | GCA_001636335_01693 | GCA_001636335_01753 | Unannotated protein. | Unannotated protein. | 0.711 |
GCA_001636335_01693 | GCA_001636335_02147 | GCA_001636335_01693 | GCA_001636335_02147 | Unannotated protein. | Unannotated protein. | 0.683 |
GCA_001636335_01693 | GCA_001636335_02833 | GCA_001636335_01693 | GCA_001636335_02833 | Unannotated protein. | Unannotated protein. | 0.756 |
GCA_001636335_01693 | deoA | GCA_001636335_01693 | GCA_001636335_01894 | Unannotated protein. | Unannotated protein. | 0.697 |
GCA_001636335_01693 | hpt | GCA_001636335_01693 | GCA_001636335_03371 | Unannotated protein. | Unannotated protein; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.693 |
GCA_001636335_01693 | psuG | GCA_001636335_01693 | GCA_001636335_00071 | Unannotated protein. | Unannotated protein; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. | 0.736 |
GCA_001636335_01693 | upp | GCA_001636335_01693 | GCA_001636335_03031 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.717 |
GCA_001636335_01694 | GCA_001636335_01693 | GCA_001636335_01694 | GCA_001636335_01693 | Unannotated protein. | Unannotated protein. | 0.732 |
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