STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CWS20_19550Unannotated protein; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family. (194 aa)    
Predicted Functional Partners:
ecfT
Unannotated protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
 0.643
GCA_001636335_02732
Unannotated protein.
   
  
 0.500
GCA_001636335_04017
Unannotated protein.
  
     0.487
CWS20_26745
Unannotated protein; Belongs to the LysR transcriptional regulatory family.
  
     0.483
GCA_001636335_01385
Unannotated protein.
  
   
 0.465
GCA_001636335_02734
Unannotated protein.
      
 0.459
ecfA-2
Unannotated protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
 0.457
ecfA
Unannotated protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
 0.424
Your Current Organism:
Bacillus horneckiae
NCBI taxonomy Id: 549687
Other names: B. horneckiae, Bacillus horneckiae Vaishampayan et al. 2010, Bacillus sp. As-14, MTCC 9535, NRRL B-59162, strain 1P01SC
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.