STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001636335_01905Unannotated protein. (303 aa)    
Predicted Functional Partners:
GCA_001636335_00345
Unannotated protein.
 
0.846
CWS20_17000
Unannotated protein.
  
 
 0.641
GCA_001636335_01904
Unannotated protein.
       0.635
CWS20_10405
Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.606
GCA_001636335_01465
Unannotated protein.
    
   0.606
mgsA
Unannotated protein; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
     
 0.602
GCA_001636335_00363
Unannotated protein.
  
 
  0.579
CWS20_27385
Unannotated protein.
 
   
 0.575
GCA_001636335_00828
Unannotated protein.
   
 
 0.568
GCA_001636335_00204
Unannotated protein.
    
 
 0.567
Your Current Organism:
Bacillus horneckiae
NCBI taxonomy Id: 549687
Other names: B. horneckiae, Bacillus horneckiae Vaishampayan et al. 2010, Bacillus sp. As-14, MTCC 9535, NRRL B-59162, strain 1P01SC
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.