STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argRUnannotated protein; Regulates arginine biosynthesis genes. (149 aa)    
Predicted Functional Partners:
GCA_001636335_00624
Unannotated protein.
  
  
 0.884
argG
Unannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.884
argH
Unannotated protein.
  
  
 0.824
GCA_001636335_02897
Unannotated protein.
  
  
 0.824
rocD
Unannotated protein; Catalyzes the interconversion of ornithine to glutamate semialdehyde.
  
  
 0.813
GCA_001636335_01962
Unannotated protein.
  
  
 0.733
dacA
Unannotated protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
   
    0.637
CWS20_25140
Unannotated protein.
  
    0.614
spo0A
Unannotated protein; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
  
    0.549
GCA_001636335_01800
Unannotated protein.
     
 0.521
Your Current Organism:
Bacillus horneckiae
NCBI taxonomy Id: 549687
Other names: B. horneckiae, Bacillus horneckiae Vaishampayan et al. 2010, Bacillus sp. As-14, MTCC 9535, NRRL B-59162, strain 1P01SC
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.