Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CWS20_00495 | CWS20_06145 | GCA_001636335_02649 | GCA_001636335_02208 | Unannotated protein; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | Unannotated protein; Belongs to the UPF0735 family. | 0.645 |
CWS20_00495 | GCA_001636335_01296 | GCA_001636335_02649 | GCA_001636335_01296 | Unannotated protein; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | Unannotated protein. | 0.607 |
CWS20_00495 | GCA_001636335_02207 | GCA_001636335_02649 | GCA_001636335_02207 | Unannotated protein; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | Unannotated protein. | 0.553 |
CWS20_00495 | GCA_001636335_02648 | GCA_001636335_02649 | GCA_001636335_02648 | Unannotated protein; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | Unannotated protein. | 0.997 |
CWS20_00495 | asd | GCA_001636335_02649 | GCA_001636335_01033 | Unannotated protein; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | Unannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.702 |
CWS20_00680 | CWS20_06145 | GCA_001636335_02677 | GCA_001636335_02208 | Unannotated protein. | Unannotated protein; Belongs to the UPF0735 family. | 0.620 |
CWS20_00680 | GCA_001636335_01296 | GCA_001636335_02677 | GCA_001636335_01296 | Unannotated protein. | Unannotated protein. | 0.404 |
CWS20_00680 | GCA_001636335_02648 | GCA_001636335_02677 | GCA_001636335_02648 | Unannotated protein. | Unannotated protein. | 0.662 |
CWS20_06145 | CWS20_00495 | GCA_001636335_02208 | GCA_001636335_02649 | Unannotated protein; Belongs to the UPF0735 family. | Unannotated protein; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | 0.645 |
CWS20_06145 | CWS20_00680 | GCA_001636335_02208 | GCA_001636335_02677 | Unannotated protein; Belongs to the UPF0735 family. | Unannotated protein. | 0.620 |
CWS20_06145 | CWS20_06165 | GCA_001636335_02208 | GCA_001636335_02212 | Unannotated protein; Belongs to the UPF0735 family. | Unannotated protein. | 0.516 |
CWS20_06145 | GCA_001636335_01296 | GCA_001636335_02208 | GCA_001636335_01296 | Unannotated protein; Belongs to the UPF0735 family. | Unannotated protein. | 0.447 |
CWS20_06145 | GCA_001636335_01819 | GCA_001636335_02208 | GCA_001636335_01819 | Unannotated protein; Belongs to the UPF0735 family. | Unannotated protein. | 0.649 |
CWS20_06145 | GCA_001636335_02207 | GCA_001636335_02208 | GCA_001636335_02207 | Unannotated protein; Belongs to the UPF0735 family. | Unannotated protein. | 0.903 |
CWS20_06145 | GCA_001636335_02210 | GCA_001636335_02208 | GCA_001636335_02210 | Unannotated protein; Belongs to the UPF0735 family. | Unannotated protein. | 0.634 |
CWS20_06145 | GCA_001636335_02648 | GCA_001636335_02208 | GCA_001636335_02648 | Unannotated protein; Belongs to the UPF0735 family. | Unannotated protein. | 0.503 |
CWS20_06145 | asd | GCA_001636335_02208 | GCA_001636335_01033 | Unannotated protein; Belongs to the UPF0735 family. | Unannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.673 |
CWS20_06145 | obg | GCA_001636335_02208 | GCA_001636335_02209 | Unannotated protein; Belongs to the UPF0735 family. | Unannotated protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.761 |
CWS20_06165 | CWS20_06145 | GCA_001636335_02212 | GCA_001636335_02208 | Unannotated protein. | Unannotated protein; Belongs to the UPF0735 family. | 0.516 |
CWS20_06165 | GCA_001636335_02210 | GCA_001636335_02212 | GCA_001636335_02210 | Unannotated protein. | Unannotated protein. | 0.540 |
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