STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001636335_02479Unannotated protein. (124 aa)    
Predicted Functional Partners:
GCA_001636335_01828
Unannotated protein.
  
  
  0.671
GCA_001636335_00241
Unannotated protein.
  
     0.665
GCA_001636335_03908
Unannotated protein.
  
     0.583
GCA_001636335_01907
Unannotated protein.
 
     0.573
pckA
Unannotated protein; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
       0.572
GCA_001636335_02201
Unannotated protein.
  
     0.569
GCA_001636335_02889
Unannotated protein.
  
     0.565
GCA_001636335_00145
Unannotated protein.
  
     0.499
GCA_001636335_00813
Unannotated protein.
  
     0.497
GCA_001636335_02613
Unannotated protein.
  
     0.482
Your Current Organism:
Bacillus horneckiae
NCBI taxonomy Id: 549687
Other names: B. horneckiae, Bacillus horneckiae Vaishampayan et al. 2010, Bacillus sp. As-14, MTCC 9535, NRRL B-59162, strain 1P01SC
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.