STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001636335_02718Unannotated protein. (339 aa)    
Predicted Functional Partners:
GCA_001636335_00225
Unannotated protein.
    
 0.842
trxA
Unannotated protein; Belongs to the thioredoxin family.
 
 0.763
GCA_001636335_00490
Unannotated protein.
  
 0.717
GCA_001636335_02263
Unannotated protein.
  
 0.717
GCA_001636335_02785
Unannotated protein.
  
 0.717
GCA_001636335_02409
Unannotated protein.
  
 0.712
CWS20_26760
Unannotated protein.
  
 
 0.692
GCA_001636335_02745
Unannotated protein.
  
 
 0.692
ahpC
Unannotated protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 
 0.692
GCA_001636335_03939
Unannotated protein.
 
 
 0.672
Your Current Organism:
Bacillus horneckiae
NCBI taxonomy Id: 549687
Other names: B. horneckiae, Bacillus horneckiae Vaishampayan et al. 2010, Bacillus sp. As-14, MTCC 9535, NRRL B-59162, strain 1P01SC
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.