Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OKH50951.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (497 aa)    
Predicted Functional Partners:
OKH50950.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.667
OKH50952.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.492
OKH47700.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.
     
  0.492
OKH46844.1
Beta-fructosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.492
NIES30_22930
Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.
     
  0.492
OKH43093.1
Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.492
OKH50843.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.405
OKH49048.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.400
OKH46876.1
Cell envelope biogenesis protein OmpA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.400
Your Current Organism:
Phormidium tenue
NCBI taxonomy Id: 549789
Other names: P. tenue NIES-30, Phormidium tenue IAM M-40, Phormidium tenue NIES-30
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