STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKH48422.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (855 aa)    
Predicted Functional Partners:
OKH44329.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.761
OKH45899.1
Competence/damage-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.
     
 0.733
OKH47492.1
TonB-dependent receptor plug; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.581
OKH47507.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.581
OKH44950.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.579
OKH48167.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.507
OKH43862.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.501
OKH48013.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.442
OKH45154.1
Adenylate/guanylate cyclase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.439
OKH47736.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.415
Your Current Organism:
Phormidium tenue
NCBI taxonomy Id: 549789
Other names: P. tenue NIES-30, Phormidium tenue IAM M-40, Phormidium tenue NIES-30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.