STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKH47130.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)    
Predicted Functional Partners:
OKH47419.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.793
OKH46567.1
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.764
OKH46157.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.698
OKH46345.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.657
OKH44998.1
DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.657
OKH46662.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.558
OKH49451.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.552
OKH45185.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.552
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
   0.531
OKH48307.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.503
Your Current Organism:
Phormidium tenue
NCBI taxonomy Id: 549789
Other names: P. tenue NIES-30, Phormidium tenue IAM M-40, Phormidium tenue NIES-30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.