STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKH45373.1Peptidase U32; Derived by automated computational analysis using gene prediction method: Protein Homology. (863 aa)    
Predicted Functional Partners:
OKH47424.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.762
OKH44982.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.728
OKH45374.1
Phosphoribulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.691
OKH49554.1
Fructose-1,6-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
    
 0.521
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
   
    0.473
OKH45371.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.464
OKH45372.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.463
OKH47721.1
Phosphoribulokinase; Catalyzes a reaction in which the CO2 acceptor molecule, RuBP, is generated via the phosphorylation of ribulose 5-phosphate with ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.440
OKH48112.1
16S rRNA (uracil(1498)-N(3))-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
   
    0.438
Your Current Organism:
Phormidium tenue
NCBI taxonomy Id: 549789
Other names: P. tenue NIES-30, Phormidium tenue IAM M-40, Phormidium tenue NIES-30
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