STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001748085_00109Unannotated protein. (216 aa)    
Predicted Functional Partners:
GCA_001748085_00108
Unannotated protein.
 0.999
GCA_001748085_00110
Unannotated protein.
 
  
 
0.997
GCA_001748085_00111
Unannotated protein.
 
 0.997
GCA_001748085_03342
Unannotated protein.
 0.994
GCA_001748085_04432
Unannotated protein.
 0.994
GCA_001748085_04431
Unannotated protein.
 0.981
GCA_001748085_04429
Unannotated protein.
 
  
 
0.977
GCA_001748085_04430
Unannotated protein.
  
  
 
0.976
GCA_001748085_03341
Unannotated protein.
  
  
 
0.975
GCA_001748085_02331
Unannotated protein.
  
  
 0.974
Your Current Organism:
Streptomyces sp. TPA0874
NCBI taxonomy Id: 549819
Other names: S. sp. TP-A0874, Streptomyces sp. TP-A0874
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.