STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001748085_00116Unannotated protein. (284 aa)    
Predicted Functional Partners:
GCA_001748085_00117
Unannotated protein.
 
  
 
0.947
GCA_001748085_00114
Unannotated protein.
 
     0.924
GCA_001748085_01400
Unannotated protein.
   
 
  0.907
GCA_001748085_00113
Unannotated protein.
 
     0.875
GCA_001748085_02845
Unannotated protein.
   
 
  0.809
GCA_001748085_03486
Unannotated protein.
   
 
  0.809
GCA_001748085_00112
Unannotated protein.
 
     0.794
GCA_001748085_00118
Unannotated protein.
       0.760
GCA_001748085_01202
Unannotated protein.
    
 0.681
GCA_001748085_02134
Unannotated protein.
     
 0.623
Your Current Organism:
Streptomyces sp. TPA0874
NCBI taxonomy Id: 549819
Other names: S. sp. TP-A0874, Streptomyces sp. TP-A0874
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.