STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001748085_00773Unannotated protein. (415 aa)    
Predicted Functional Partners:
GCA_001748085_03179
Unannotated protein.
       0.625
GCA_001748085_03180
Unannotated protein.
       0.625
GCA_001748085_03989
Unannotated protein.
   
    0.558
GCA_001748085_02877
Unannotated protein.
  
  
  0.492
GCA_001748085_03125
Unannotated protein.
  
     0.444
GCA_001748085_03546
Unannotated protein.
  
   
 0.444
GCA_001748085_02360
Unannotated protein.
   
 
  0.427
GCA_001748085_01378
Unannotated protein.
    
  0.419
GCA_001748085_04097
Unannotated protein.
  
     0.405
Your Current Organism:
Streptomyces sp. TPA0874
NCBI taxonomy Id: 549819
Other names: S. sp. TP-A0874, Streptomyces sp. TP-A0874
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.