STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001748085_01344Unannotated protein. (215 aa)    
Predicted Functional Partners:
GCA_001748085_01345
Unannotated protein.
  
  
 0.952
GCA_001748085_02783
Unannotated protein.
 
     0.687
GCA_001748085_04268
Unannotated protein.
  
     0.656
GCA_001748085_01343
Unannotated protein.
       0.628
GCA_001748085_02784
Unannotated protein.
       0.625
GCA_001748085_00764
Unannotated protein.
 
     0.523
GCA_001748085_00774
Unannotated protein.
  
     0.513
GCA_001748085_00905
Unannotated protein.
  
     0.475
GCA_001748085_03203
Unannotated protein.
  
     0.437
GCA_001748085_01342
Unannotated protein.
       0.408
Your Current Organism:
Streptomyces sp. TPA0874
NCBI taxonomy Id: 549819
Other names: S. sp. TP-A0874, Streptomyces sp. TP-A0874
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.