STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001748085_01970Unannotated protein. (155 aa)    
Predicted Functional Partners:
GCA_001748085_01969
Unannotated protein.
 
     0.818
GCA_001748085_03761
Unannotated protein.
  
     0.614
GCA_001748085_02942
Unannotated protein.
  
     0.601
GCA_001748085_00010
Unannotated protein.
  
     0.567
GCA_001748085_00832
Unannotated protein.
  
     0.535
GCA_001748085_03207
Unannotated protein.
  
     0.529
GCA_001748085_03581
Unannotated protein.
  
     0.526
GCA_001748085_03185
Unannotated protein.
  
     0.521
GCA_001748085_03557
Unannotated protein.
  
     0.520
GCA_001748085_02042
Unannotated protein.
  
     0.516
Your Current Organism:
Streptomyces sp. TPA0874
NCBI taxonomy Id: 549819
Other names: S. sp. TP-A0874, Streptomyces sp. TP-A0874
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.