STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001748085_02448Unannotated protein. (248 aa)    
Predicted Functional Partners:
GCA_001748085_02447
Unannotated protein.
       0.823
GCA_001748085_01969
Unannotated protein.
  
   
 0.808
GCA_001748085_00843
Unannotated protein.
      
 0.783
GCA_001748085_04129
Unannotated protein.
  
     0.763
GCA_001748085_02446
Unannotated protein.
       0.721
GCA_001748085_03497
Unannotated protein.
  
     0.693
GCA_001748085_04389
Unannotated protein.
  
    0.608
GCA_001748085_03248
Unannotated protein.
  
     0.574
GCA_001748085_04165
Unannotated protein.
   
  
 0.499
GCA_001748085_03753
Unannotated protein.
   
    0.483
Your Current Organism:
Streptomyces sp. TPA0874
NCBI taxonomy Id: 549819
Other names: S. sp. TP-A0874, Streptomyces sp. TP-A0874
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.