STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001748085_03878Unannotated protein. (193 aa)    
Predicted Functional Partners:
GCA_001748085_00066
Unannotated protein.
   
 
 0.952
GCA_001748085_03531
Unannotated protein.
  
  
 0.779
GCA_001748085_02518
Unannotated protein.
  
  
 0.775
GCA_001748085_00012
Unannotated protein.
  
    0.770
GCA_001748085_03405
Unannotated protein.
    
  0.769
GCA_001748085_03907
Unannotated protein.
 
  
 0.767
GCA_001748085_01992
Unannotated protein.
   
  0.736
GCA_001748085_01886
Unannotated protein.
    
  0.719
GCA_001748085_03879
Unannotated protein.
  
  
 0.661
GCA_001748085_02467
Unannotated protein.
  
  
 0.641
Your Current Organism:
Streptomyces sp. TPA0874
NCBI taxonomy Id: 549819
Other names: S. sp. TP-A0874, Streptomyces sp. TP-A0874
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.