STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT66568.1N-acetylmuramoyl-L-alanine amidase. (262 aa)    
Predicted Functional Partners:
SIT66560.1
Spore germination protein.
 
  
 0.939
SIT68679.1
Stage V sporulation protein AC.
  
  
 0.790
SIT73518.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.787
SIT66497.1
Stage IV sporulation protein A.
 
   
 0.759
SIT69654.1
Stage II sporulation protein R.
 
   
 0.746
SIT68671.1
Stage V sporulation protein AD.
  
  
 0.745
SIT68662.1
Stage V sporulation protein AE.
  
     0.739
SIT69449.1
Sporulation transcriptional regulator SpoIIID.
  
  
 0.735
SIT93359.1
Transcriptional regulator, AbrB family.
  
     0.687
SIT66575.1
Membrane proteinase PrsW, cleaves anti-sigma factor RsiW, M82 family; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family.
 
     0.680
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.