STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT66674.1Cytochrome c-type biogenesis protein CcsB. (395 aa)    
Predicted Functional Partners:
SIT66682.1
Cytochrome c biogenesis protein.
 
  
 0.985
SIT66689.1
Peroxiredoxin.
  
  
 0.876
SIT66377.1
Menaquinol-cytochrome c reductase cytochrome b/c subunit.
 
  
 0.827
SIT66387.1
Menaquinol-cytochrome c reductase iron-sulfur subunit.
 
    0.769
SIT66381.1
Menaquinol-cytochrome c reductase cytochrome b subunit.
  
  
 0.763
SIT69108.1
Cytochrome c551.
 
   
 0.717
SIT66504.1
Hypothetical protein.
  
     0.692
SIT81177.1
Protein of unknown function.
  
     0.692
SIT93227.1
Zinc-ribbon containing domain-containing protein.
  
     0.688
SIT83425.1
HemX protein.
  
     0.685
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.