STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT67148.1Transcriptional regulator, GntR family. (242 aa)    
Predicted Functional Partners:
SIT67141.1
Nucleoside-binding protein.
 
    0.891
SIT73328.1
GntR family transcriptional regulator.
  
     0.772
SIT67132.1
Nucleoside ABC transporter ATP-binding protein.
  
    0.610
SIT67116.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.526
SIT67124.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.497
SIT68278.1
Transcriptional regulator, XRE family with cupin sensor.
  
  
 0.446
SIT71577.1
Transcriptional regulator, XRE family with cupin sensor.
  
  
 0.446
SIT72401.1
Transcriptional regulator, XRE family with cupin sensor.
  
  
 0.446
SIT72949.1
Transcriptional regulator, XRE family with cupin sensor.
  
  
 0.446
SIT85049.1
Transcriptional regulator, GntR family.
  
   
0.418
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
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