node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIT67312.1 | SIT67434.1 | SAMN05428946_0195 | SAMN05428946_0214 | Regulator of sigma E protease. | Signal peptidase I; Belongs to the peptidase S26 family. | 0.722 |
SIT67312.1 | secF | SAMN05428946_0195 | SAMN05428946_1557 | Regulator of sigma E protease. | SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.445 |
SIT67427.1 | SIT67434.1 | SAMN05428946_0213 | SAMN05428946_0214 | Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Signal peptidase I; Belongs to the peptidase S26 family. | 0.791 |
SIT67427.1 | rimM | SAMN05428946_0213 | SAMN05428946_0217 | Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | 0.572 |
SIT67427.1 | rnc | SAMN05428946_0213 | SAMN05428946_0224 | Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.536 |
SIT67427.1 | rnhB | SAMN05428946_0213 | SAMN05428946_0212 | Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.687 |
SIT67427.1 | rplS | SAMN05428946_0213 | SAMN05428946_0215 | Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.885 |
SIT67434.1 | SIT67312.1 | SAMN05428946_0214 | SAMN05428946_0195 | Signal peptidase I; Belongs to the peptidase S26 family. | Regulator of sigma E protease. | 0.722 |
SIT67434.1 | SIT67427.1 | SAMN05428946_0214 | SAMN05428946_0213 | Signal peptidase I; Belongs to the peptidase S26 family. | Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.791 |
SIT67434.1 | SIT68106.1 | SAMN05428946_0214 | SAMN05428946_0321 | Signal peptidase I; Belongs to the peptidase S26 family. | Cell division-specific peptidoglycan biosynthesis regulator FtsW; Belongs to the SEDS family. | 0.493 |
SIT67434.1 | SIT87367.1 | SAMN05428946_0214 | SAMN05428946_2077 | Signal peptidase I; Belongs to the peptidase S26 family. | Bifunctional non-homologous end joining protein LigD. | 0.498 |
SIT67434.1 | lepA | SAMN05428946_0214 | SAMN05428946_1514 | Signal peptidase I; Belongs to the peptidase S26 family. | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.717 |
SIT67434.1 | rimM | SAMN05428946_0214 | SAMN05428946_0217 | Signal peptidase I; Belongs to the peptidase S26 family. | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | 0.602 |
SIT67434.1 | rnc | SAMN05428946_0214 | SAMN05428946_0224 | Signal peptidase I; Belongs to the peptidase S26 family. | RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.826 |
SIT67434.1 | rnhB | SAMN05428946_0214 | SAMN05428946_0212 | Signal peptidase I; Belongs to the peptidase S26 family. | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.736 |
SIT67434.1 | rplS | SAMN05428946_0214 | SAMN05428946_0215 | Signal peptidase I; Belongs to the peptidase S26 family. | Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.608 |
SIT67434.1 | secF | SAMN05428946_0214 | SAMN05428946_1557 | Signal peptidase I; Belongs to the peptidase S26 family. | SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.569 |
SIT68106.1 | SIT67434.1 | SAMN05428946_0321 | SAMN05428946_0214 | Cell division-specific peptidoglycan biosynthesis regulator FtsW; Belongs to the SEDS family. | Signal peptidase I; Belongs to the peptidase S26 family. | 0.493 |
SIT87367.1 | SIT67434.1 | SAMN05428946_2077 | SAMN05428946_0214 | Bifunctional non-homologous end joining protein LigD. | Signal peptidase I; Belongs to the peptidase S26 family. | 0.498 |
lepA | SIT67434.1 | SAMN05428946_1514 | SAMN05428946_0214 | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | Signal peptidase I; Belongs to the peptidase S26 family. | 0.717 |