STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT68861.1Peptide/nickel transport system substrate-binding protein. (578 aa)    
Predicted Functional Partners:
SIT68852.1
Peptide/nickel transport system permease protein.
  0.989
SIT68844.1
Peptide/nickel transport system permease protein.
  0.986
SIT68879.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.973
SIT68872.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.968
SIT93200.1
Peptide/nickel transport system permease protein.
 
   0.616
SIT93204.1
Peptide/nickel transport system permease protein.
 
   0.607
SIT88999.1
Peptide/nickel transport system permease protein.
 
   0.604
SIT71763.1
Peptide/nickel transport system permease protein; Manually curated.
 
   0.592
SIT89007.1
Peptide/nickel transport system permease protein.
 
   0.586
SIT72626.1
Peptide/nickel transport system permease protein.
 
   0.580
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.