STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT69017.1Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain. (235 aa)    
Predicted Functional Partners:
SIT68975.1
Protein of unknown function.
 
     0.762
SIT66547.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
    
 0.661
SIT69486.1
Conserved hypothetical integral membrane protein.
  
     0.657
SIT90920.1
Gas vesicle protein.
 
     0.636
SIT71325.1
NTE family protein.
    
  0.600
SIT68422.1
YkyB-like protein.
  
     0.596
addB
DNA helicase/exodeoxyribonuclease V, subunit B; ATP-dependent DNA helicase; Belongs to the helicase family. AddB/RexB type 1 subfamily.
 
     0.563
SIT80811.1
5-bromo-4-chloroindolyl phosphate hydrolysis protein.
  
   
 0.542
SIT80764.1
Hypothetical protein.
  
     0.533
SIT69026.1
4-azaleucine resistance probable transporter AzlC.
       0.527
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
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