STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT70939.1Bifunctional autolysin. (1160 aa)    
Predicted Functional Partners:
SIT73518.1
N-acetylmuramoyl-L-alanine amidase.
  
 
 0.783
SIT92565.1
Hypothetical protein.
  
 
   0.782
SIT75069.1
CAAX protease self-immunity.
    
   0.748
SIT83801.1
3D (Asp-Asp-Asp) domain-containing protein.
   
  
 0.628
SIT69434.1
DNA-directed RNA polymerase subunit beta.
  
     0.596
SIT70973.1
CDP-glycerol glycerophosphotransferase, TagB/SpsB family.
 
     0.585
tagH
Teichoic acid transport system ATP-binding protein; Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system.
 
     0.575
SIT70965.1
Teichoic acid transport system permease protein.
 
     0.569
SIT93399.1
Uncharacterized conserved protein YabE, contains G5 and tandem DUF348 domains.
   
    0.554
SIT70991.1
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
 
     0.531
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.