STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT71300.1Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily. (376 aa)    
Predicted Functional Partners:
SIT71284.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.999
SIT71293.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.999
SIT71276.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 0.984
SIT87263.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.982
SIT87266.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.979
SIT87260.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.924
SIT91097.1
Putative ABC transport system permease protein.
 
      0.859
SIT68296.1
Spermidine/putrescine transport system permease protein.
  
 0.616
SIT68313.1
Spermidine/putrescine transport system substrate-binding protein.
  
 0.567
potA-2
iron(III) transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
  
 
0.549
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.