STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT72054.1DNA-binding transcriptional regulator, MarR family. (147 aa)    
Predicted Functional Partners:
SIT72046.1
Peptide/nickel transport system substrate-binding protein.
       0.773
SIT72949.1
Transcriptional regulator, XRE family with cupin sensor.
  
 0.670
SIT68278.1
Transcriptional regulator, XRE family with cupin sensor.
  
 0.669
SIT71577.1
Transcriptional regulator, XRE family with cupin sensor.
  
 0.669
SIT72401.1
Transcriptional regulator, XRE family with cupin sensor.
  
 0.669
SIT87929.1
PTS system, N-acetylglucosamine-specific IIC component.
     
 0.652
SIT92679.1
PTS system IIB component, Glc family /PTS system IIC component, Glc family.
     
 0.652
SIT88863.1
Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
  0.610
SIT88955.1
Oxalate decarboxylase.
  
  
  0.600
SIT69729.1
Fructose-bisphosphate aldolase, class II.
   
 
  0.599
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.