STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT73259.1Sarcosine oxidase subunit alpha. (357 aa)    
Predicted Functional Partners:
SIT73244.1
Sarcosine oxidase subunit beta.
  
  0.996
SIT71845.1
Sarcosine oxidase subunit beta.
  
  0.972
SIT73268.1
Sarcosine oxidase subunit alpha.
 
  
  0.972
SIT73251.1
BFD-like [2Fe-2S] binding domain-containing protein.
 
 
 0.966
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
 
   
 0.932
SIT71865.1
Sarcosine oxidase subunit alpha.
 
  
  0.885
SIT71858.1
BFD-like [2Fe-2S] binding domain-containing protein.
 
  
 0.857
SIT73276.1
D-amino-acid dehydrogenase.
 
  
  0.776
SIT92605.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 
 0.755
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
       0.727
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.