STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT81189.1Membrane protein CcdC involved in cytochrome C biogenesis. (180 aa)    
Predicted Functional Partners:
SIT81202.1
Thioredoxin.
       0.773
SIT81212.1
Cytochrome c-type biogenesis protein.
     
 0.735
SIT92956.1
Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein.
  
     0.715
SIT67087.1
Protein of unknown function.
  
     0.640
SIT91919.1
Uncharacterized conserved protein YutE, UPF0331/DUF86 family.
  
     0.540
SIT80477.1
HEAT repeat-containing protein.
  
     0.517
SIT93132.1
Uncharacterized protein YfkK, UPF0435 family; Belongs to the UPF0435 family.
  
     0.509
SIT69994.1
YwhD family protein.
  
     0.502
SIT68617.1
Enterochelin esterase.
  
     0.490
SIT68303.1
Spermidine/putrescine transport system permease protein.
   
    0.483
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
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