STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT83282.1Bundlin. (142 aa)    
Predicted Functional Partners:
SIT83276.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
  
 0.984
SIT83242.1
Type IV pilus assembly protein PilB.
  
 0.924
SIT83221.1
Type IV pilus assembly protein PilC.
  
  
 0.871
SIT83212.1
Type IV pilus assembly protein PilA.
  
 
 0.865
SIT81991.1
Competence-related pilin export protein ComGA.
  
 0.819
SIT81970.1
Competence protein ComGC.
  
 
 0.788
SIT83270.1
Hypothetical protein.
       0.782
SIT81943.1
Competence protein ComGF.
  
  
 0.730
SIT81981.1
Competence protein ComGB.
  
  
 0.698
SIT69143.1
Competence protein ComFA.
   
  
 0.682
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.