Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SIT66387.1 | SIT68079.1 | SAMN05428946_0070 | SAMN05428946_0317 | Menaquinol-cytochrome c reductase iron-sulfur subunit. | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.999 |
| SIT66387.1 | SIT71858.1 | SAMN05428946_0070 | SAMN05428946_0790 | Menaquinol-cytochrome c reductase iron-sulfur subunit. | BFD-like [2Fe-2S] binding domain-containing protein. | 0.999 |
| SIT66387.1 | SIT72490.1 | SAMN05428946_0070 | SAMN05428946_0868 | Menaquinol-cytochrome c reductase iron-sulfur subunit. | Tricarballylate dehydrogenase. | 0.883 |
| SIT66387.1 | SIT83545.1 | SAMN05428946_0070 | SAMN05428946_1627 | Menaquinol-cytochrome c reductase iron-sulfur subunit. | Succinate dehydrogenase subunit B. | 0.962 |
| SIT66387.1 | SIT83553.1 | SAMN05428946_0070 | SAMN05428946_1628 | Menaquinol-cytochrome c reductase iron-sulfur subunit. | Succinate dehydrogenase subunit A. | 0.910 |
| SIT66387.1 | SIT83564.1 | SAMN05428946_0070 | SAMN05428946_1629 | Menaquinol-cytochrome c reductase iron-sulfur subunit. | Succinate dehydrogenase subunit C. | 0.922 |
| SIT66387.1 | mdh | SAMN05428946_0070 | SAMN05428946_1777 | Menaquinol-cytochrome c reductase iron-sulfur subunit. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.449 |
| SIT66387.1 | sucC | SAMN05428946_0070 | SAMN05428946_0211 | Menaquinol-cytochrome c reductase iron-sulfur subunit. | succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.652 |
| SIT66387.1 | sucD | SAMN05428946_0070 | SAMN05428946_0210 | Menaquinol-cytochrome c reductase iron-sulfur subunit. | succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.775 |
| SIT68079.1 | SIT66387.1 | SAMN05428946_0317 | SAMN05428946_0070 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Menaquinol-cytochrome c reductase iron-sulfur subunit. | 0.999 |
| SIT68079.1 | SIT71858.1 | SAMN05428946_0317 | SAMN05428946_0790 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | BFD-like [2Fe-2S] binding domain-containing protein. | 0.999 |
| SIT68079.1 | SIT72490.1 | SAMN05428946_0317 | SAMN05428946_0868 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Tricarballylate dehydrogenase. | 0.867 |
| SIT68079.1 | SIT83545.1 | SAMN05428946_0317 | SAMN05428946_1627 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Succinate dehydrogenase subunit B. | 0.990 |
| SIT68079.1 | SIT83553.1 | SAMN05428946_0317 | SAMN05428946_1628 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Succinate dehydrogenase subunit A. | 0.867 |
| SIT68079.1 | SIT83564.1 | SAMN05428946_0317 | SAMN05428946_1629 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Succinate dehydrogenase subunit C. | 0.987 |
| SIT68079.1 | SIT84980.1 | SAMN05428946_0317 | SAMN05428946_1779 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Citrate synthase; Belongs to the citrate synthase family. | 0.807 |
| SIT68079.1 | mdh | SAMN05428946_0317 | SAMN05428946_1777 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.595 |
| SIT68079.1 | sucC | SAMN05428946_0317 | SAMN05428946_0211 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.539 |
| SIT68079.1 | sucD | SAMN05428946_0317 | SAMN05428946_0210 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.796 |
| SIT71858.1 | SIT66387.1 | SAMN05428946_0790 | SAMN05428946_0070 | BFD-like [2Fe-2S] binding domain-containing protein. | Menaquinol-cytochrome c reductase iron-sulfur subunit. | 0.999 |
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