STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT83969.1Two component transcriptional regulator, LuxR family. (206 aa)    
Predicted Functional Partners:
SIT83960.1
Two-component system, NarL family, sensor histidine kinase DesK.
 0.998
SIT74984.1
Two-component system, NarL family, vancomycin resistance sensor histidine kinase VraS/two-component system, NarL family, sensor histidine kinase LiaS.
 0.929
SIT69175.1
Two-component system, NarL family, sensor histidine kinase DegS.
 0.927
SIT83951.1
Omega-6 fatty acid desaturase (delta-12 desaturase).
 
   
 0.885
SIT87199.1
Tetratricopeptide repeat-containing protein.
    
 0.805
SIT70456.1
PAS domain S-box-containing protein.
  
 
 0.804
SIT83293.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.748
SIT83304.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.748
SIT88603.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.746
SIT89514.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.709
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.