STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT85433.1Uncharacterized protein YtpQ, UPF0354 family. (271 aa)    
Predicted Functional Partners:
SIT85426.1
tRNA-binding protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
 
    0.839
SIT85401.1
Uncharacterized protein YoxC, contains an MCP-like domain.
 
     0.827
SIT85756.1
8-oxo-dGTP diphosphatase; Belongs to the Nudix hydrolase family.
  
     0.772
SIT93173.1
Inner membrane protein.
  
     0.766
SIT68773.1
Predicted dithiol-disulfide isomerase, DsbA family.
  
     0.762
ezrA
Septation ring formation regulator; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.758
SIT67023.1
Cell fate regulator YmcA, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family.
  
     0.757
SIT68126.1
Uncharacterized protein YlaI.
  
     0.755
SIT80764.1
Hypothetical protein.
  
     0.748
SIT91962.1
Disulfide oxidoreductase YuzD.
  
     0.742
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
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