STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT87098.1Two-component system, OmpR family, response regulator VicR. (243 aa)    
Predicted Functional Partners:
SIT87101.1
PAS/PAC sensor signal transduction histidine kinase.
 0.983
SIT84928.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
 0.955
SIT88603.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 
 0.950
SIT66660.1
Two-component system, OmpR family, sensor histidine kinase ResE.
 
 0.947
SIT91111.1
Signal transduction histidine kinase.
  0.938
SIT87289.1
Signal transduction histidine kinase.
 
  0.923
SIT74661.1
Signal transduction histidine kinase.
 0.907
SIT72096.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 
  0.904
SIT69959.1
Diguanylate cyclase.
 
 
    0.900
SIT76237.1
Signal transduction histidine kinase.
  0.894
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.