STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT87396.1NAD(P)H-dependent FMN reductase. (189 aa)    
Predicted Functional Partners:
SIT72490.1
Tricarballylate dehydrogenase.
   
  0.873
SIT87392.1
Hypothetical protein.
       0.682
SIT87399.1
Macrolide transport system ATP-binding/permease protein.
    
  0.636
SIT67242.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
    
  0.504
SIT66142.1
Riboflavin synthase alpha chain.
   
 
  0.459
SIT75234.1
NitT/TauT family transport system substrate-binding protein.
  
 
  0.444
SIT75737.1
NitT/TauT family transport system substrate-binding protein.
  
 
  0.444
SIT87388.1
Hypothetical protein.
       0.423
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.