STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT87957.1DNA-binding transcriptional regulator, MarR family. (151 aa)    
Predicted Functional Partners:
SIT87963.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
       0.773
SIT87929.1
PTS system, N-acetylglucosamine-specific IIC component.
     
 0.652
SIT92679.1
PTS system IIB component, Glc family /PTS system IIC component, Glc family.
     
 0.652
SIT87951.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
       0.505
SIT81800.1
Stage III sporulation protein AE.
  
     0.501
SIT93340.1
Stage II sporulation protein E.
  
     0.466
SIT66560.1
Spore germination protein.
  
     0.451
SIT70232.1
Spore coat polysaccharide biosynthesis protein SpsG, predicted glycosyltransferase.
  
     0.448
SIT87971.1
methylated-DNA-[protein]-cysteine S-methyltransferase.
       0.411
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.