Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIT72712.1 | SIT88233.1 | SAMN05428946_0894 | SAMN05428946_2243 | SH3 domain-containing protein. | Copper transport repressor, CopY/TcrY family. | 0.640 |
SIT72712.1 | SIT93073.1 | SAMN05428946_0894 | SAMN05428946_2938 | SH3 domain-containing protein. | Zn-dependent protease with chaperone function. | 0.820 |
SIT72712.1 | smc | SAMN05428946_0894 | SAMN05428946_0223 | SH3 domain-containing protein. | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.507 |
SIT87165.1 | SIT88233.1 | SAMN05428946_1970 | SAMN05428946_2243 | Hypothetical protein. | Copper transport repressor, CopY/TcrY family. | 0.619 |
SIT88225.1 | SIT88233.1 | SAMN05428946_2242 | SAMN05428946_2243 | Copper chaperone/Cu+-exporting ATPase. | Copper transport repressor, CopY/TcrY family. | 0.516 |
SIT88225.1 | SIT88497.1 | SAMN05428946_2242 | SAMN05428946_2283 | Copper chaperone/Cu+-exporting ATPase. | Copper chaperone. | 0.868 |
SIT88233.1 | SIT72712.1 | SAMN05428946_2243 | SAMN05428946_0894 | Copper transport repressor, CopY/TcrY family. | SH3 domain-containing protein. | 0.640 |
SIT88233.1 | SIT87165.1 | SAMN05428946_2243 | SAMN05428946_1970 | Copper transport repressor, CopY/TcrY family. | Hypothetical protein. | 0.619 |
SIT88233.1 | SIT88225.1 | SAMN05428946_2243 | SAMN05428946_2242 | Copper transport repressor, CopY/TcrY family. | Copper chaperone/Cu+-exporting ATPase. | 0.516 |
SIT88233.1 | SIT88240.1 | SAMN05428946_2243 | SAMN05428946_2244 | Copper transport repressor, CopY/TcrY family. | UV-damage endonuclease. | 0.508 |
SIT88233.1 | SIT88391.1 | SAMN05428946_2243 | SAMN05428946_2267 | Copper transport repressor, CopY/TcrY family. | Hypothetical protein. | 0.812 |
SIT88233.1 | SIT88497.1 | SAMN05428946_2243 | SAMN05428946_2283 | Copper transport repressor, CopY/TcrY family. | Copper chaperone. | 0.748 |
SIT88233.1 | SIT93073.1 | SAMN05428946_2243 | SAMN05428946_2938 | Copper transport repressor, CopY/TcrY family. | Zn-dependent protease with chaperone function. | 0.711 |
SIT88233.1 | SIT93112.1 | SAMN05428946_2243 | SAMN05428946_2950 | Copper transport repressor, CopY/TcrY family. | Hypothetical protein. | 0.614 |
SIT88233.1 | smc | SAMN05428946_2243 | SAMN05428946_0223 | Copper transport repressor, CopY/TcrY family. | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.551 |
SIT88240.1 | SIT88233.1 | SAMN05428946_2244 | SAMN05428946_2243 | UV-damage endonuclease. | Copper transport repressor, CopY/TcrY family. | 0.508 |
SIT88391.1 | SIT88233.1 | SAMN05428946_2267 | SAMN05428946_2243 | Hypothetical protein. | Copper transport repressor, CopY/TcrY family. | 0.812 |
SIT88497.1 | SIT88225.1 | SAMN05428946_2283 | SAMN05428946_2242 | Copper chaperone. | Copper chaperone/Cu+-exporting ATPase. | 0.868 |
SIT88497.1 | SIT88233.1 | SAMN05428946_2283 | SAMN05428946_2243 | Copper chaperone. | Copper transport repressor, CopY/TcrY family. | 0.748 |
SIT93073.1 | SIT72712.1 | SAMN05428946_2938 | SAMN05428946_0894 | Zn-dependent protease with chaperone function. | SH3 domain-containing protein. | 0.820 |
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