STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT89143.1Hypothetical protein. (189 aa)    
Predicted Functional Partners:
SIT89150.1
Lysophospholipase L1.
       0.675
SIT89159.1
NTP pyrophosphatase, house-cleaning of non-canonical NTPs.
       0.675
SIT66096.1
UvrD/REP helicase N-terminal domain-containing protein.
  
     0.627
SIT72924.1
Cytosine permease.
  
     0.509
SIT81865.1
Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
  
     0.496
SIT89167.1
DNA-3-methyladenine glycosylase; Belongs to the DNA glycosylase MPG family.
       0.484
sspI
Small acid-soluble spore protein I (minor); Belongs to the SspI family.
  
     0.410
SIT89424.1
PH domain-containing protein.
  
     0.400
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
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