STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT91114.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (223 aa)    
Predicted Functional Partners:
SIT91111.1
Signal transduction histidine kinase.
  0.996
SIT84928.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
 
  0.981
SIT66660.1
Two-component system, OmpR family, sensor histidine kinase ResE.
  0.979
SIT87289.1
Signal transduction histidine kinase.
 
  0.979
SIT83304.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.958
SIT88603.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 
 0.951
SIT83293.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.923
SIT76237.1
Signal transduction histidine kinase.
  0.919
SIT74661.1
Signal transduction histidine kinase.
 0.908
SIT87101.1
PAS/PAC sensor signal transduction histidine kinase.
  0.906
Your Current Organism:
Edaphobacillus lindanitolerans
NCBI taxonomy Id: 550447
Other names: Bacillus sp. MNA4, CCM 7584, DSM 22424, E. lindanitolerans, strain MNA4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.