Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIT68921.1 | SIT91436.1 | SAMN05428946_0425 | SAMN05428946_2680 | Metal-sulfur cluster biosynthetic enzyme. | Iron-regulated ABC transporter ATPase subunit SufC. | 0.796 |
SIT68921.1 | SIT91442.1 | SAMN05428946_0425 | SAMN05428946_2681 | Metal-sulfur cluster biosynthetic enzyme. | Fe-S cluster assembly protein SufD. | 0.733 |
SIT68921.1 | SIT91447.1 | SAMN05428946_0425 | SAMN05428946_2682 | Metal-sulfur cluster biosynthetic enzyme. | Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.622 |
SIT68921.1 | SIT91452.1 | SAMN05428946_0425 | SAMN05428946_2683 | Metal-sulfur cluster biosynthetic enzyme. | Nitrogen fixation protein NifU. | 0.728 |
SIT68921.1 | SIT91458.1 | SAMN05428946_0425 | SAMN05428946_2684 | Metal-sulfur cluster biosynthetic enzyme. | Iron-regulated ABC transporter membrane component SufB. | 0.684 |
SIT91137.1 | SIT91436.1 | SAMN05428946_2603 | SAMN05428946_2680 | Hypothetical protein. | Iron-regulated ABC transporter ATPase subunit SufC. | 0.544 |
SIT91137.1 | SIT91442.1 | SAMN05428946_2603 | SAMN05428946_2681 | Hypothetical protein. | Fe-S cluster assembly protein SufD. | 0.554 |
SIT91137.1 | SIT91447.1 | SAMN05428946_2603 | SAMN05428946_2682 | Hypothetical protein. | Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.495 |
SIT91137.1 | SIT91452.1 | SAMN05428946_2603 | SAMN05428946_2683 | Hypothetical protein. | Nitrogen fixation protein NifU. | 0.745 |
SIT91137.1 | SIT91458.1 | SAMN05428946_2603 | SAMN05428946_2684 | Hypothetical protein. | Iron-regulated ABC transporter membrane component SufB. | 0.554 |
SIT91436.1 | SIT68921.1 | SAMN05428946_2680 | SAMN05428946_0425 | Iron-regulated ABC transporter ATPase subunit SufC. | Metal-sulfur cluster biosynthetic enzyme. | 0.796 |
SIT91436.1 | SIT91137.1 | SAMN05428946_2680 | SAMN05428946_2603 | Iron-regulated ABC transporter ATPase subunit SufC. | Hypothetical protein. | 0.544 |
SIT91436.1 | SIT91442.1 | SAMN05428946_2680 | SAMN05428946_2681 | Iron-regulated ABC transporter ATPase subunit SufC. | Fe-S cluster assembly protein SufD. | 0.998 |
SIT91436.1 | SIT91447.1 | SAMN05428946_2680 | SAMN05428946_2682 | Iron-regulated ABC transporter ATPase subunit SufC. | Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.999 |
SIT91436.1 | SIT91452.1 | SAMN05428946_2680 | SAMN05428946_2683 | Iron-regulated ABC transporter ATPase subunit SufC. | Nitrogen fixation protein NifU. | 0.973 |
SIT91436.1 | SIT91458.1 | SAMN05428946_2680 | SAMN05428946_2684 | Iron-regulated ABC transporter ATPase subunit SufC. | Iron-regulated ABC transporter membrane component SufB. | 0.999 |
SIT91436.1 | SIT91974.1 | SAMN05428946_2680 | SAMN05428946_2767 | Iron-regulated ABC transporter ATPase subunit SufC. | Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family. | 0.544 |
SIT91442.1 | SIT68921.1 | SAMN05428946_2681 | SAMN05428946_0425 | Fe-S cluster assembly protein SufD. | Metal-sulfur cluster biosynthetic enzyme. | 0.733 |
SIT91442.1 | SIT91137.1 | SAMN05428946_2681 | SAMN05428946_2603 | Fe-S cluster assembly protein SufD. | Hypothetical protein. | 0.554 |
SIT91442.1 | SIT91436.1 | SAMN05428946_2681 | SAMN05428946_2680 | Fe-S cluster assembly protein SufD. | Iron-regulated ABC transporter ATPase subunit SufC. | 0.998 |
page 1 of 3